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IBISBA is designed to accelerate end-to-end bioprocess development, linking best-in-class R&D facilities to provide seamless multi-technology services.
Focusing on the different R&D phases in bioprocess development, IBISBA offers services related to computer-assisted design of biocomponents, construction of enzymes and microbial strains, the fermentation, downstream processing and project knowledge asset management.
Web page: http://www.ibisba.eu
This is an example of workflow run with target muconic acid. The results is a tar with a collection of SBML, fused with GEM SBML model (yeast in this case)
Date Published: 15th Jun 2020
Publication Type: Journal
Date Published: No date defined
Publication Type: Not specified
PubMed ID: 30321422
Citation: Nucleic Acids Res. 2019 Jan 8;47(D1):D1229-D1235. doi: 10.1093/nar/gky940.
Given one or a collection of heterolgous pathways in SBML files, generate the SBOL for the constructs and the assembly protocols to build them
Given a collection of SBML files with the heterologous pathways, calculate the FBA and the Gibbs free energy of the pathways.
Galaxy workflow that predicts heterologous pathways for the production of a compound of interest in an organism of interest