Projects: Uncurated Protocols Library, TRANSCRIPTPROM - Integrative and comparative analyses of response of Pichia pastoris, FLOX: FLavin-containing OXidoreductases, PlanOvac, Muconic Acid Production, HIGHFLUX, Promoters 4 Pichia, An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data, Template library, Evocolour - The evolution and genetics of Flavobacteria forming structurally coloured colonies for sustainable biomaterials, Extreme - Genomic approach for extremozymes screening of thermophilic/anaerobic Caldicoprobacter algerensis strain, HMOzyme, PILOT-MP - Pilot scale process development for microbial proteins, UMB - Upscaling and optimisation of microalgae production for bivalves hatchery, Public announcements and documents, IBISBA Library, Biocare, MEOX, Coculture, YarroFuels, PlasticPutida, Lipro-alga, Curated Protocols Library, IBISBA 1.0 deliverables, PREP-IBISBA deliverables, Cyanofcs, Example testing project
Institutions: UAB - Universitat Autònoma de Barcelonahttps://orcid.org/0000-0001-5626-429X
Expertise: Metabolic engineering, metabolic modelling, systems biology, MFA, Mathematical Modelling, Fluxomics, Microbiology, Closed ecologycal systems, Pichia pastoris, photosynthetic bacteria, Kinetic modelling
Tools: Fermentation, Metabolomics, Model organisms, Microbiology, Mathematical Modelling, Matlab, ODE, Computational and theoretical biology, metabolic flux analysis, COBRA, Copasi, RAVEN, metabolic modelling
Projects: Uncurated Protocols Library, FLOX: FLavin-containing OXidoreductases, PlanOvac, HIGHFLUX, SporeDel, Yeast Glycerol, Galambr, SULFOCEL, An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data, Template library, Muconic Acid Production in Yeast, IBISBA 1.0 deliverables, PREP-IBISBA deliverables, Biocare, test, DBTL-P, Upscale of the biocatalytic transformation of Free Fatty Acids into high-value products (BIOFFA), B-PAC, BIOFFA, GLYCOMICS, KorallionBio, MAROX, PROTEIFROM, SUPI
Institutions: UNIMAN - The University of Manchester, UAB - Universitat Autònoma de Barcelona, CNR - Consiglio Nazionale delle Ricerche, INSAT - Institut National des Science Appliquees de Toulouse, VTT - Teknologian tutkimuskeskus VTT Oy, VITO - Vlaamse Instelling voor Technologisch Onderzoek N.V.
Institutions: CNR - Consiglio Nazionale delle Ricerchehttps://orcid.org/0000-0002-8211-2297
WP leader of "Communication, Outreach and Dissemination" and Head of the Italian Joint Laboratory ProtEnz.
The research activity of Dr. B. Cobucci Ponzano concerns the study of the structure / function relationship of proteins and enzymes and of the mechanistic aspects related to hydrolysis and to enzymatic synthesis of glycosides. In particular, it deals with enzymes that modify carbohydrates (glycosidase) mainly from (hyper) thermophilic microorganisms, especially Archaea. In the lasts years, ...
Responsible of the Transnational Access of IBISBA1.0
Research Director at INRA Director Life Sciences at Toulouse White Biotechnology
Addressing a gap in European industrial biotechnology, IBISBA’s mission is to provide world-class cutting-edge research infrastructure services enabling the development of industrial biotechnology as a technological cornerstone of the circular bioeconomy. In this regard, IBISBA aims to contribute to the delivery of Europe’s ambition to be the first climate neutral continent in 2050. To fulfil its mission, IBISBA is building an interoperable network involving some of Europe’s most significant, ...
Business Process Models (BPMs) are workflows operating at a relatively coarse-grained meta-workflow level. BPMs enable coordination between computational workflows and manual steps using event mechanisms and incorporating business rules. BPMs are now well established with an established execution language and graphical notation (BPMN). BPMs, however, are complex to make and normally aimed at experts to develop on behalf of users to run. A number of commercial enterprises (Oracle, Microsoft, IBM) ...
The IBISBAHub is a shared space for recording, accessing and sharing data and assets of the IBISBA project. IBISBAHub is a customised and extended installation of the FAIRDOM SEEK asset management platform
The IBISBAHub provides an online portal with
● Self-managed project space for organising, sharing and disseminating assets arising from multi-partner collaborations, such as the TNA’s as well as project events
● Complement local data management or provide data management resources if local ...