Web page: http://www.manchester.ac.uk/
Country: United Kingdom
Projects: IBISBA Library, Development Project, TRANSCRIPTPROM - Integrative and comparative analyses of response of Pichia pastoris, FLOX: FLavin-containing OXidoreductases, PlanOvac, Muconic Acid Production, HIGHFLUX, spreadsheet test, Example project, Multi-site aspergillus, Promoters 4 Pichia
Institutions: UNIMAN - The University of Manchester, CSIC - Agencia Estatal Consejo Superior de Investigaciones Cientificas, INSAT - Institut National des Science Appliquees de Toulouse, UAB - Universitat Autònoma de Barcelona, CNR - Consiglio Nazionale delle Ricerche, CEA - Commissariat a l'Energie Atomique et aux Energies Alternatives
Projects: IBISBA Library, Development Project, FLOX: FLavin-containing OXidoreductases, PlanOvac, HIGHFLUX, SporeDel, Yeast Glycerol, Galambr, SULFOCEL, An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data, spreadsheet test
Institutions: UNIMAN - The University of Manchester, UAB - Universitat Autònoma de Barcelona, CNR - Consiglio Nazionale delle Ricerche, INSAT - Institut National des Science Appliquees de Toulouse, VTT - Teknologian tutkimuskeskus VTT Oy, VITO - Vlaamse Instelling voor Technologisch Onderzoek N.V.
Institutions: UNIMAN - The University of Manchesterhttps://orcid.org/0000-0003-1219-2137
Professor of Computer Science, Head of Node ELIXIR UK and ELIXIR ExCo for Interoperability, Coordinator of FAIRDOM Association e.V.
Leads WP7 in the IBISBA1.0 which is providing support for data management and scientific workflows.
The ecological niche occupied by a fungal species, its pathogenicity and its usefulness as a microbial cell factory to a large degree depends on its secretome. Protein secretion usually requires the presence of a N- terminal signal peptide (SP) and by scanning for this feature using available highly accurate SP-prediction tools, the fraction of potentially secreted proteins can be directly predicted.
However, prediction of a SP does not guarantee that the protein is actually secreted and current