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Related assays

87 Assays visible to you, out of a total of 142

Obtain proteomes

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Comparative Genomics

Technology type: Next generation sequencing

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: In-Silico Prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:02, Last updated: 18th May 2020 at 18:02

Signal Peptide Predictions

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: In-Silico Prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:04

Orthology identification

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: In-Silico Prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:05

GPI Anchor Predictions

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: In-Silico Prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:05

Growth experiment

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: Culture experiments

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:06

Liquid chromatography tandem mass spectrometry

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Protein Identification

Technology type: Liquid Chromatography-tandom Mass Spectrometry

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: Culture experiments

Organisms: No organisms

Protocols: No Protocols

Data files: Proteins detected by high-throughput mass spect...

Created: 18th May 2020 at 18:31, Last updated: 22nd Jun 2020 at 13:39

Mass Spectrometry Analysis

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: Validation of the secretome of Aspergillus niger

Organisms: No organisms

Protocols: No Protocols

Data files: Proteins detected by high-throughput mass spect...

Created: 18th May 2020 at 18:32, Last updated: 22nd Jun 2020 at 13:40

Obtain metabolic model

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: Metabolic model analysis

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:33

Identify enzymes from spectra

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: In-silico prediction and mass spectrometric val...

Study: Metabolic model analysis

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 18th May 2020 at 18:35

Receive name of production host

spreadsheet test

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: 1 hidden item

Study: 1 hidden item

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 20th May 2020 at 09:58

ANOTHER ASSAY!

spreadsheet test

No description specified

Contributor: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: 1 hidden item

Study: 1 hidden item

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 20th May 2020 at 16:50

Obtain proteomes

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: In silico prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

Signal peptide predictions

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: In silico prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

Orthology identification

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: In silico prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

GPI Anchor predictions

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: In silico prediction

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

growth experiment

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: Culture experiments

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

Liquid chromatography tandem mass spectrometric

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: Culture experiments

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

MS analysis

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: validation of the secretome of A. niger

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

Obtain metabolic model

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: Metabolic model analysis

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

Identify enzymes from specta

Example project

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Understanding the extracellular environment in ...

Study: Metabolic model analysis

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 23rd May 2020 at 07:39

Order synthetic DNA

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Withdraw parts from storage

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

In vitro assembly of the DNA construct

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare transformation competent cells of the cloning host organism

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare liquid cultivation medium for transformation

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare solid cultivation medium for transformation

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare cultivation media for making glycerol stocks

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Transform genetic material into cloning host organism

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Colony picking for verification of the genetic material

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare template DNA for verification of the genetic material

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Verify by recombinant clone screening

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Make glycerol stock for part storage

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare cultivation media for transformation step

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Prepare cultivation media for cultivation after colony picking

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Transformation

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Colony picking

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Preparation and distribution of transformation medium in microplate format

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Preparation and distribution of recovery medium in microplate format

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Cell preparation from stock solution

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Select transformation conditions

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Transformation

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Incubation of cells in recovery medium

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Automated HT spreadind using colony picker with compartementalized Qtrays

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Automated recovery of transformant and distribution in appropriate format

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Recombinant clone screening and selection (depends on transformation implementation)

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Make glycerol stock for strain storage

TestProjectForPopulation

No description specified

Contributor: IBISBA Admin

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 15:15

Order synthetic DNA

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Withdraw parts from storage

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

In vitro assembly of the DNA construct

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare transformation competent cells of the cloning host organism

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare liquid cultivation medium for transformation

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare solid cultivation medium for transformation

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare cultivation media for making glycerol stocks

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Transform genetic material into cloning host organism

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Colony picking for verification of the genetic material

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare template DNA for verification of the genetic material

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Verify by recombinant clone screening

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Make glycerol stock for part storage

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare cultivation media for transformation step

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Prepare cultivation media for cultivation after colony picking

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Transformation

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Colony picking

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Preparation and distribution of transformation medium in microplate format

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Preparation and distribution of recovery medium in microplate format

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Cell preparation from stock solution

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Select transformation conditions

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Transformation

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Incubation of cells in recovery medium

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Automated HT spreadind using colony picker with compartementalized Qtrays

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Automated recovery of transformant and distribution in appropriate format

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Recombinant clone screening and selection (depends on transformation implementation)

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Make glycerol stock for strain storage

PopulationTest2

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain engineering

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 2nd Jul 2020 at 16:50

Strain Revitalization

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Management for Yeast

Study: Strain Transfer for Yeast

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 14:48

Deposit Strain to Storage

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Management for Yeast

Study: Strain Transfer for Yeast

Organisms: Saccharomyces cerevisiae : CEN.PK113-7D (wild-type / wild-type)

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 14:51

Prepare transformation of competent cells

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Assemble Parts

Organisms: Saccharomyces cerevisiae

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 15:01

Colony Picking for verification of Genetic Material

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Assemble Parts

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 15:02

Verify by recombinant clone screening

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Assemble Parts

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 15:03

Prepare Genetic material for Transformation

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: 1 hidden item

Created: 5th Jul 2020 at 15:06, Last updated: 5th Jul 2020 at 20:21

Transformation and Colony Picking

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 15:08, Last updated: 5th Jul 2020 at 18:10

Recombinant Clone Screening and Selection

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Transformation of production host

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 5th Jul 2020 at 15:10

Procure Synthetic DNA

Muconic Acid Developemnt from Yeast

No description specified

Contributor: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Strain Engineering for Yeast

Study: Assemble Parts

Organisms: Saccharomyces cerevisiae

Protocols: No Protocols

Data files: Synthetic DNA Construct

Created: 5th Jul 2020 at 16:37, Last updated: 5th Jul 2020 at 19:27

Obtain annotated genome for production host

Muconic Acid Population Sample

Proper description.

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Computational strain design

Study: Metabolic strain design

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 6th Jul 2020 at 15:04, Last updated: 6th Jul 2020 at 15:04

Measure uptake kinetics

Muconic Acid Population Sample

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Computational strain design

Study: Metabolic strain design

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 6th Jul 2020 at 15:04

Estimate market cost of substrate

Muconic Acid Population Sample

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Computational strain design

Study: Metabolic strain design

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 6th Jul 2020 at 15:04

Estimate toxicity for host

Muconic Acid Population Sample

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Computational strain design

Study: Metabolic strain design

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 6th Jul 2020 at 15:04

Change medium

Muconic Acid Population Sample

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Computational strain design

Study: Metabolic strain design

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 6th Jul 2020 at 15:04

Change temperature

Muconic Acid Population Sample

No description specified

Contributor: Stefan Helfrich

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Computational strain design

Study: Metabolic strain design

Organisms: No organisms

Protocols: No Protocols

Data files: No Data files

Created: 6th Jul 2020 at 15:04